GraphAlignment
This is the development version of GraphAlignment; for the stable release version, see GraphAlignment.
GraphAlignment
Bioconductor version: Development (3.18)
Graph alignment is an extension package for the R programming environment which provides functions for finding an alignment between two networks based on link and node similarity scores. (J. Berg and M. Laessig, "Cross-species analysis of biological networks by Bayesian alignment", PNAS 103 (29), 10967-10972 (2006))
Author: Joern P. Meier <mail at ionflux.org>, Michal Kolar, Ville Mustonen, Michael Laessig, and Johannes Berg.
Maintainer: Joern P. Meier <mail at ionflux.org>
citation("GraphAlignment")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("GraphAlignment")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GraphAlignment")| GraphAlignment | R Script | |
| Reference Manual | ||
| LICENSE | Text |
Details
| biocViews | GraphAndNetwork, Network, Software |
| Version | 1.65.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (15.5 years) |
| License | file LICENSE |
| Depends | |
| Imports | |
| Linking To | |
| Suggests | |
| System Requirements | |
| Enhances | |
| URL | http://www.thp.uni-koeln.de/~berg/GraphAlignment/ |
See More
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GraphAlignment_1.65.0.tar.gz |
| Windows Binary | GraphAlignment_1.65.0.zip |
| macOS Binary (x86_64) | GraphAlignment_1.65.0.tgz |
| macOS Binary (arm64) | GraphAlignment_1.65.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GraphAlignment |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GraphAlignment |
| Bioc Package Browser | https://code.bioconductor.org/browse/GraphAlignment/ |
| Package Short Url | https://bioconductor.org/packages/GraphAlignment/ |
| Package Downloads Report | Download Stats |