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OLIN

This is the development version of OLIN; for the stable release version, see OLIN.

Optimized local intensity-dependent normalisation of two-color microarrays

Bioconductor version: Development (3.18)

Functions for normalisation of two-color microarrays by optimised local regression and for detection of artefacts in microarray data

Author: Matthias Futschik <mfutschik at ualg.pt>

Maintainer: Matthias Futschik <mfutschik at ualg.pt>

Citation (from within R, enter citation("OLIN")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("OLIN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OLIN")
Introduction to OLIN PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.79.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 18 years)
License GPL-2
Depends R (>= 2.10), methods, locfit, marray
Imports graphics, grDevices, limma, marray, methods, stats
Linking To
Suggests convert
System Requirements
Enhances
URL http://olin.sysbiolab.eu
See More
Depends On Me OLINgui
Imports Me OLINgui
Suggests Me maigesPack
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package OLIN_1.79.0.tar.gz
Windows Binary OLIN_1.79.0.zip
macOS Binary (x86_64) OLIN_1.79.0.tgz
macOS Binary (arm64) OLIN_1.79.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/OLIN
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/OLIN
Bioc Package Browser https://code.bioconductor.org/browse/OLIN/
Package Short Url https://bioconductor.org/packages/OLIN/
Package Downloads Report Download Stats