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PepsNMR

This is the development version of PepsNMR; for the stable release version, see PepsNMR.

Pre-process 1H-NMR FID signals

Bioconductor version: Development (3.18)

This package provides R functions for common pre-procssing steps that are applied on 1H-NMR data. It also provides a function to read the FID signals directly in the Bruker format.

Author: Manon Martin [aut, cre], Bernadette Govaerts [aut, ths], Benoît Legat [aut], Paul H.C. Eilers [aut], Pascal de Tullio [dtc], Bruno Boulanger [ctb], Julien Vanwinsberghe [ctb]

Maintainer: Manon Martin <manon.martin at uclouvain.be>

Citation (from within R, enter citation("PepsNMR")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("PepsNMR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PepsNMR")
Application of PepsNMR on the Human Serum dataset HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews DataImport, Metabolomics, Preprocessing, Software, Visualization
Version 1.19.0
In Bioconductor since BioC 3.8 (R-3.5) (5 years)
License GPL-2 | file LICENSE
Depends R (>= 3.6)
Imports Matrix, ptw, ggplot2, gridExtra, matrixStats, reshape2, methods, graphics, stats
Linking To
Suggests knitr, markdown, rmarkdown, BiocStyle, PepsNMRData
System Requirements
Enhances
URL https://github.com/ManonMartin/PepsNMR
Bug Reports https://github.com/ManonMartin/PepsNMR/issues
See More
Depends On Me
Imports Me ASICS
Suggests Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PepsNMR_1.19.0.tar.gz
Windows Binary PepsNMR_1.19.0.zip
macOS Binary (x86_64) PepsNMR_1.19.0.tgz
macOS Binary (arm64) PepsNMR_1.19.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/PepsNMR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/PepsNMR
Bioc Package Browser https://code.bioconductor.org/browse/PepsNMR/
Package Short Url https://bioconductor.org/packages/PepsNMR/
Package Downloads Report Download Stats