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RPA

This is the development version of RPA; for the stable release version, see RPA.

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: Development (3.18)

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays.

Author: Leo Lahti [aut, cre]

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Citation (from within R, enter citation("RPA")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RPA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RPA")
RPA R package HTML
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews GeneExpression, Microarray, Preprocessing, QualityControl, Software
Version 1.57.0
In Bioconductor since BioC 2.5 (R-2.10) (14 years)
License BSD_2_clause + file LICENSE
Depends R (>= 3.1.1), affy, BiocGenerics, BiocStyle, methods, rmarkdown
Imports phyloseq
Linking To
Suggests knitr, parallel
System Requirements
Enhances
URL https://github.com/antagomir/RPA
Bug Reports https://github.com/antagomir/RPA
See More
Depends On Me prebs
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RPA_1.57.0.tar.gz
Windows Binary RPA_1.57.0.zip
macOS Binary (x86_64) RPA_1.57.0.tgz
macOS Binary (arm64) RPA_1.57.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RPA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RPA
Bioc Package Browser https://code.bioconductor.org/browse/RPA/
Package Short Url https://bioconductor.org/packages/RPA/
Package Downloads Report Download Stats