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RSeqAn

This is the development version of RSeqAn; for the stable release version, see RSeqAn.

R SeqAn

Bioconductor version: Development (3.18)

Headers and some wrapper functions from the SeqAn C++ library for ease of usage in R.

Author: August Guang [aut, cre]

Maintainer: August Guang <august.guang at gmail.com>

Citation (from within R, enter citation("RSeqAn")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RSeqAn")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RSeqAn")
Introduction to Using RSeqAn HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews Infrastructure, Software
Version 1.21.0
In Bioconductor since BioC 3.7 (R-3.5) (5.5 years)
License BSD_3_clause + file LICENSE
Depends
Imports Rcpp
Linking To Rcpp
Suggests knitr, rmarkdown, testthat
System Requirements
Enhances
URL
Bug Reports https://github.com/compbiocore/RSeqAn/issues
See More
Depends On Me
Imports Me qckitfastq
Suggests Me
Links To Me qckitfastq
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RSeqAn_1.21.0.tar.gz
Windows Binary RSeqAn_1.21.0.zip
macOS Binary (x86_64) RSeqAn_1.21.0.tgz
macOS Binary (arm64) RSeqAn_1.21.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RSeqAn
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RSeqAn
Bioc Package Browser https://code.bioconductor.org/browse/RSeqAn/
Package Short Url https://bioconductor.org/packages/RSeqAn/
Package Downloads Report Download Stats