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Rcollectl

This is the development version of Rcollectl; for the stable release version, see Rcollectl.

Help use collectl with R in Linux, to measure resource consumption in R processes

Bioconductor version: Development (3.18)

Provide functions to obtain instrumentation data on processes in a unix environment. Parse output of a collectl run. Vizualize aspects of system usage over time, with annotation.

Author: Vincent Carey [aut, cre] , Yubo Cheng [aut]

Maintainer: Vincent Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("Rcollectl")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Rcollectl")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rcollectl")
Rcollectl HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Infrastructure, Software
Version 1.1.1
In Bioconductor since BioC 3.17 (R-4.3) (< 6 months)
License Artistic-2.0
Depends
Imports utils, ggplot2, lubridate, processx
Linking To
Suggests knitr, BiocStyle, knitcitations, sessioninfo, rmarkdown, testthat, covr
System Requirements collectl
Enhances
URL https://github.com/vjcitn/Rcollectl
Bug Reports https://support.bioconductor.org/t/Rcollectl
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcollectl_1.1.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/Rcollectl
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rcollectl
Bioc Package Browser https://code.bioconductor.org/browse/Rcollectl/
Package Short Url https://bioconductor.org/packages/Rcollectl/
Package Downloads Report Download Stats