This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

arrayQuality

This is the development version of arrayQuality; for the stable release version, see arrayQuality.

Assessing array quality on spotted arrays

Bioconductor version: Development (3.18)

Functions for performing print-run and array level quality assessment.

Author: Agnes Paquet and Jean Yee Hwa Yang <yeehwa at stat.berkeley.edu>

Maintainer: Agnes Paquet <paquetagnes at yahoo.com>

Citation (from within R, enter citation("arrayQuality")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("arrayQuality")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Microarray, QualityControl, Software, TwoChannel, Visualization
Version 1.79.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 18 years)
License LGPL
Depends R (>= 2.2.0)
Imports graphics, grDevices, grid, gridBase, hexbin, limma, marray, methods, RColorBrewer, stats, utils
Linking To
Suggests mclust, MEEBOdata, HEEBOdata
System Requirements
Enhances
URL http://arrays.ucsf.edu/
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package arrayQuality_1.79.0.tar.gz
Windows Binary arrayQuality_1.79.0.zip
macOS Binary (x86_64) arrayQuality_1.79.0.tgz
macOS Binary (arm64) arrayQuality_1.79.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/arrayQuality
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/arrayQuality
Bioc Package Browser https://code.bioconductor.org/browse/arrayQuality/
Package Short Url https://bioconductor.org/packages/arrayQuality/
Package Downloads Report Download Stats