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coGPS

This is the development version of coGPS; for the stable release version, see coGPS.

cancer outlier Gene Profile Sets

Bioconductor version: Development (3.18)

Gene Set Enrichment Analysis of P-value based statistics for outlier gene detection in dataset merged from multiple studies

Author: Yingying Wei, Michael Ochs

Maintainer: Yingying Wei <ywei at jhsph.edu>

Citation (from within R, enter citation("coGPS")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("coGPS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("coGPS")
coGPS PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews DifferentialExpression, Microarray, Software
Version 1.45.0
In Bioconductor since BioC 2.10 (R-2.15) (11.5 years)
License GPL-2
Depends R (>= 2.13.0)
Imports graphics, grDevices
Linking To
Suggests limma
System Requirements
Enhances
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Depends On Me
Imports Me
Suggests Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package coGPS_1.45.0.tar.gz
Windows Binary coGPS_1.45.0.zip (64-bit only)
macOS Binary (x86_64) coGPS_1.45.0.tgz
macOS Binary (arm64) coGPS_1.45.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/coGPS
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/coGPS
Bioc Package Browser https://code.bioconductor.org/browse/coGPS/
Package Short Url https://bioconductor.org/packages/coGPS/
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