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miRNAmeConverter

This is the development version of miRNAmeConverter; for the stable release version, see miRNAmeConverter.

Convert miRNA Names to Different miRBase Versions

Bioconductor version: Development (3.18)

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Citation (from within R, enter citation("miRNAmeConverter")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("miRNAmeConverter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews Preprocessing, Software, miRNA
Version 1.29.0
In Bioconductor since BioC 3.3 (R-3.3) (7.5 years)
License Artistic-2.0
Depends miRBaseVersions.db
Imports DBI, AnnotationDbi, reshape2
Linking To
Suggests methods, testthat, knitr, rmarkdown
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package miRNAmeConverter_1.29.0.tar.gz
Windows Binary miRNAmeConverter_1.29.0.zip
macOS Binary (x86_64) miRNAmeConverter_1.29.0.tgz
macOS Binary (arm64) miRNAmeConverter_1.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRNAmeConverter
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/miRNAmeConverter
Bioc Package Browser https://code.bioconductor.org/browse/miRNAmeConverter/
Package Short Url https://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report Download Stats