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profileScoreDist

This is the development version of profileScoreDist; for the stable release version, see profileScoreDist.

Profile score distributions

Bioconductor version: Development (3.18)

Regularization and score distributions for position count matrices.

Author: Paal O. Westermark

Maintainer: Paal O. Westermark <pal-olof.westermark at charite.de>

Citation (from within R, enter citation("profileScoreDist")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("profileScoreDist")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("profileScoreDist")
Using profileScoreDist PDF R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews GeneRegulation, Software, StatisticalMethod
Version 1.29.0
In Bioconductor since BioC 3.3 (R-3.3) (7.5 years)
License MIT + file LICENSE
Depends R (>= 3.3)
Imports Rcpp, BiocGenerics, methods, graphics
Linking To Rcpp
Suggests BiocStyle, knitr, MotifDb
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package profileScoreDist_1.29.0.tar.gz
Windows Binary
macOS Binary (x86_64) profileScoreDist_1.29.0.tgz
macOS Binary (arm64) profileScoreDist_1.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/profileScoreDist
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/profileScoreDist
Bioc Package Browser https://code.bioconductor.org/browse/profileScoreDist/
Package Short Url https://bioconductor.org/packages/profileScoreDist/
Package Downloads Report Download Stats