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scatterHatch

This is the development version of scatterHatch; for the stable release version, see scatterHatch.

Creates hatched patterns for scatterplots

Bioconductor version: Development (3.18)

The objective of this package is to efficiently create scatterplots where groups can be distinguished by color and texture. Visualizations in computational biology tend to have many groups making it difficult to distinguish between groups solely on color. Thus, this package is useful for increasing the accessibility of scatterplot visualizations to those with visual impairments such as color blindness.

Author: Atul Deshpande [aut, cre]

Maintainer: Atul Deshpande <adeshpande at jhu.edu>

Citation (from within R, enter citation("scatterHatch")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("scatterHatch")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scatterHatch")
Creating a Scatterplot with Texture HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews CellBiology, SingleCell, Software, Spatial, Visualization
Version 1.7.0
In Bioconductor since BioC 3.14 (R-4.1) (2 years)
License MIT + file LICENSE
Depends R (>= 4.1)
Imports grid, ggplot2, plyr, spatstat.geom, stats, grDevices
Linking To
Suggests knitr, rmarkdown, testthat
System Requirements
Enhances
URL https://github.com/FertigLab/scatterHatch
Bug Reports https://github.com/FertigLab/scatterHatch/issues
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package scatterHatch_1.7.0.tar.gz
Windows Binary scatterHatch_1.7.0.zip
macOS Binary (x86_64) scatterHatch_1.7.0.tgz
macOS Binary (arm64) scatterHatch_1.7.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/scatterHatch
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/scatterHatch
Bioc Package Browser https://code.bioconductor.org/browse/scatterHatch/
Package Short Url https://bioconductor.org/packages/scatterHatch/
Package Downloads Report Download Stats