This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

statTarget

This is the development version of statTarget; for the stable release version, see statTarget.

Statistical Analysis of Molecular Profiles

Bioconductor version: Development (3.18)

A streamlined tool provides a graphical user interface for quality control based signal drift correction (QC-RFSC), integration of data from multi-batch MS-based experiments, and the comprehensive statistical analysis in metabolomics and proteomics.

Author: Hemi Luan

Maintainer: Hemi Luan <hemi.luan at gmail.com>

Citation (from within R, enter citation("statTarget")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("statTarget")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("statTarget")
QC_free approach with Combat method HTML R Script
statTarget2 for pathway analysis HTML R Script
statTarget2 On using the Graphical User Interface HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews BatchEffect, ComBat, DifferentialExpression, ImmunoOncology, Lipidomics, Machine Learning, MassSpectrometry, Metabolomics, MultipleComparison, Normalization, Preprocessing, Proteomics, QC-RFSC, QualityControl, Software, Visualization
Version 1.31.0
In Bioconductor since BioC 3.4 (R-3.3) (7 years)
License LGPL (>= 3)
Depends R (>= 3.6.0)
Imports randomForest, plyr, pdist, ROC, utils, grDevices, graphics, rrcov, stats, pls, impute
Linking To
Suggests testthat, BiocStyle, knitr, rmarkdown
System Requirements
Enhances
URL https://stattarget.github.io
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package statTarget_1.31.0.tar.gz
Windows Binary statTarget_1.31.0.zip
macOS Binary (x86_64) statTarget_1.31.0.tgz
macOS Binary (arm64) statTarget_1.31.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/statTarget
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/statTarget
Bioc Package Browser https://code.bioconductor.org/browse/statTarget/
Package Short Url https://bioconductor.org/packages/statTarget/
Package Downloads Report Download Stats