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BSgenome.Mmusculus.UCSC.mm39

This is the development version of BSgenome.Mmusculus.UCSC.mm39; for the stable release version, see BSgenome.Mmusculus.UCSC.mm39.

Full genome sequences for Mus musculus (UCSC genome mm39, based on GRCm39)

Bioconductor version: Development (3.18)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (genome mm39, based on assembly GRCm39) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm39")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BSgenome.Mmusculus.UCSC.mm39")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews AnnotationData, BSgenome, Genetics, Mus_musculus
Version 1.4.3
License Artistic-2.0
Depends R (>= 3.5.0), BSgenome(>= 1.60.0)
Imports BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Mmusculus.UCSC.mm39_1.4.3.tar.gz
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Package Short Url https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm39/
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