grasp2db

This is the development version of grasp2db; for the stable release version, see grasp2db.

grasp2db, sqlite wrap of GRASP 2.0

Bioconductor version: Development (3.18)

grasp2db, sqlite wrap of NHLBI GRASP 2.0, an extended GWAS catalog.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("grasp2db")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("grasp2db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("grasp2db")

grasp2db: interface to a high density GWAS catalogue	PDF	R Script
Notes on Bioconductor's GRASP2 database curation	HTML	R Script
Reference Manual	PDF
README	Text
LICENSE	Text

Details

biocViews	AnnotationData
Version	1.1.0
License	Artistic-2.0 + file LICENSE
Depends	RSQLite, dplyr, dbplyr
Imports	methods, utils, stats, GenomeInfoDb, AnnotationHub, digest
Linking To
Suggests	gwascat, knitr
System Requirements
Enhances	AnnotationHubData
URL

Depends On Me
Imports Me
Suggests Me	AnnotationHubData
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	grasp2db_1.1.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/grasp2db/
Package Downloads Report	Download Stats