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BeadArrayUseCases

This is the development version of BeadArrayUseCases; for the stable release version, see BeadArrayUseCases.

Analysing Illumina BeadArray expression data using Bioconductor

Bioconductor version: Development (3.18)

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("BeadArrayUseCases")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BeadArrayUseCases")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadArrayUseCases")
BeadArrayUseCases.pdf PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, MicroarrayData
Version 1.39.0
License GPL-2
Depends
Imports beadarray(>= 2.3.18), limma, GEOquery
Linking To
Suggests Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
System Requirements
Enhances
URL
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Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BeadArrayUseCases_1.39.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/BeadArrayUseCases
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BeadArrayUseCases
Package Short Url https://bioconductor.org/packages/BeadArrayUseCases/
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