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COHCAPanno

This is the development version of COHCAPanno; for the stable release version, see COHCAPanno.

Annotations for City of Hope CpG Island Analysis Pipeline

Bioconductor version: Development (3.18)

Provides genomic location, nearby CpG island and nearby gene information for common Illumina methylation array platforms

Author: Charles Warden

Maintainer: Charles Warden <cwarden45 at gmail.com>

Citation (from within R, enter citation("COHCAPanno")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("COHCAPanno")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("COHCAPanno")
COHCAPanno Vignette PDF R Script
Reference Manual PDF

Details

biocViews ArrayExpress, CpGIslandData, ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version 1.37.0
License GPL-3
Depends R (>= 2.10)
Imports
Linking To
Suggests
System Requirements
Enhances
URL
See More
Depends On Me COHCAP
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package COHCAPanno_1.37.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/COHCAPanno
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/COHCAPanno
Package Short Url https://bioconductor.org/packages/COHCAPanno/
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