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ChAMPdata

This is the development version of ChAMPdata; for the stable release version, see ChAMPdata.

Data Packages for ChAMP package

Bioconductor version: Development (3.18)

Provides datasets needed for ChAMP including a test dataset and blood controls for CNA analysis.

Author: Yuan Tian [ctb,aut], Tiffany Morris [cre,aut], Lee Stirling [ctb] and Andrew Teschendorff [ctb]

Maintainer: Yuan Tian <champ450k at gmail.com>

Citation (from within R, enter citation("ChAMPdata")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ChAMPdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData
Version 2.33.0
License GPL-3
Depends R (>= 3.5.0), GenomicRanges(>= 1.22.4), BiocGenerics(>= 0.16.1)
Imports
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Depends On Me ChAMP
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChAMPdata_2.33.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ChAMPdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChAMPdata
Package Short Url https://bioconductor.org/packages/ChAMPdata/
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