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ChIPXpressData

This is the development version of ChIPXpressData; for the stable release version, see ChIPXpressData.

ChIPXpress Pre-built Databases

Bioconductor version: Development (3.18)

Contains pre-built mouse (GPL1261) and human (GPL570) database of gene expression profiles to be used for ChIPXpress ranking.

Author: George Wu

Maintainer: George Wu <gewu at jhsph.edu>

Citation (from within R, enter citation("ChIPXpressData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ChIPXpressData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, Mus_musculus_Data
Version 1.39.0
License GPL (>=2)
Depends bigmemory
Imports
Linking To
Suggests
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Depends On Me ChIPXpress
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChIPXpressData_1.39.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ChIPXpressData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChIPXpressData
Package Short Url https://bioconductor.org/packages/ChIPXpressData/
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