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EpiMix.data

This is the development version of EpiMix.data; for the stable release version, see EpiMix.data.

Data for the EpiMix package

Bioconductor version: Development (3.18)

Supporting data for the EpiMix R package. It include: - HM450_lncRNA_probes.rda - HM450_miRNA_probes.rda - EPIC_lncRNA_probes.rda - EPIC_miRNA_probes.rda - EpigenomeMap.rda - LUAD.sample.annotation - TCGA_BatchData - MET.data - mRNA.data - microRNA.data - lncRNA.data - Sample_EpiMixResults_lncRNA - Sample_EpiMixResults_miRNA - Sample_EpiMixResults_Regular - Sample_EpiMixResults_Enhancer - lncRNA expression data of tumors from TCGA that are stored in the ExperimentHub.

Author: Yuanning Zheng [aut, cre]

Maintainer: Yuanning Zheng <eric2021 at stanford.edu>

Citation (from within R, enter citation("EpiMix.data")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("EpiMix.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EpiMix.data")
vignette HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, Genome, RNASeqData
Version 1.3.2
License GPL-3
Depends R (>= 4.2.0), ExperimentHub(>= 0.99.6)
Imports
Linking To
Suggests rmarkdown, knitr
System Requirements
Enhances
URL
Bug Reports https://github.com/gevaertlab/EpiMix/issues
See More
Depends On Me EpiMix
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EpiMix.data_1.3.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/EpiMix.data
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EpiMix.data
Package Short Url https://bioconductor.org/packages/EpiMix.data/
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