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ReactomeGSA.data

This is the development version of ReactomeGSA.data; for the stable release version, see ReactomeGSA.data.

Companion data package for the ReactomeGSA package

Bioconductor version: Development (3.18)

Companion data sets to showcase the functionality of the ReactomeGSA package. This package contains proteomics and RNA-seq data of the melanoma B-cell induction study by Griss et al. and scRNA-seq data from Jerby-Arnon et al.

Author: Johannes Griss [aut, cre]

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Citation (from within R, enter citation("ReactomeGSA.data")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ReactomeGSA.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, ExpressionData, Homo_sapiens_Data, Proteome, RNASeqData
Version 1.15.0
License Artistic-2.0
Depends R (>= 3.6), limma, edgeR, ReactomeGSA, Seurat
Imports
Linking To
Suggests
System Requirements
Enhances
URL https://github.com/reactome/ReactomeGSA.data/issues
Bug Reports https://github.com/reactome/ReactomeGSA.data
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Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ReactomeGSA.data
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ReactomeGSA.data
Package Short Url https://bioconductor.org/packages/ReactomeGSA.data/
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