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TabulaMurisData

This is the development version of TabulaMurisData; for the stable release version, see TabulaMurisData.

10x And SmartSeq2 Data From The Tabula Muris Consortium

Bioconductor version: Development (3.18)

Access to processed 10x (droplet) and SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data from the Tabula Muris consortium (http://tabula-muris.ds.czbiohub.org/).

Author: Charlotte Soneson [aut, cre]

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, enter citation("TabulaMurisData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TabulaMurisData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TabulaMurisData")
Tabula Muris data HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews ExperimentData, RNASeqData, SingleCellData
Version 1.19.0
License MIT + file LICENSE
Depends R (>= 3.5)
Imports ExperimentHub, utils
Linking To
Suggests knitr, rmarkdown, BiocStyle, SingleCellExperiment, scran, scater, iSEE, testthat
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TabulaMurisData_1.19.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TabulaMurisData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TabulaMurisData
Package Short Url https://bioconductor.org/packages/TabulaMurisData/
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