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VectraPolarisData

This is the development version of VectraPolarisData; for the stable release version, see VectraPolarisData.

Vectra Polaris and Vectra 3 multiplex single-cell imaging data

Bioconductor version: Development (3.18)

Provides two multiplex imaging datasets collected on Vectra instruments at the University of Colorado Anschutz Medical Campus. Data are provided as a Spatial Experiment objects. Data is provided in tabular form and has been segmented and phenotyped using Inform software. Raw .tiff files are not included.

Author: Wrobel Julia [aut, cre] , Tusharkanti Ghosh [aut]

Maintainer: Wrobel Julia <julia.wrobel at cuanschutz.edu>

Citation (from within R, enter citation("VectraPolarisData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("VectraPolarisData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("VectraPolarisData")
VectraPolarisData HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, ExperimentHub, Homo_sapiens_Data, ReproducibleResearch, SingleCellData, SpatialData
Version 1.5.0
License Artistic-2.0
Depends ExperimentHub, SpatialExperiment, utils
Imports
Linking To
Suggests BiocStyle, knitr, rmarkdown, dplyr
System Requirements
Enhances
URL https://github.com/julia-wrobel/VectraPolarisData
Bug Reports https://support.bioconductor.org/t/VectraPolarisData
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package VectraPolarisData_1.5.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/VectraPolarisData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/VectraPolarisData
Package Short Url https://bioconductor.org/packages/VectraPolarisData/
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