aracne.networks
This is the development version of aracne.networks; for the stable release version, see aracne.networks.
ARACNe-inferred gene networks from TCGA tumor datasets
Bioconductor version: Development (3.18)
This package contains ARACNe-inferred networks from TCGA tumor datasets. It also contains a function to export them into plain-text format.
Author: Federico M. Giorgi
Maintainer: Federico M. Giorgi <federico.giorgi at gmail.com>, Mariano Alvarez <reef103 at gmail.com>
citation("aracne.networks")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("aracne.networks")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("aracne.networks")| Using aracne.networks | R Script | |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | CancerData, ExperimentData, Genome, Homo_sapiens_Data |
| Version | 1.27.0 |
| License | file LICENSE |
| Depends | R (>= 3.3), viper |
| Imports | |
| Linking To | |
| Suggests | |
| System Requirements | |
| Enhances | |
| URL |
See More
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | aracne.networks_1.27.0.tar.gz |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/aracne.networks |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/aracne.networks |
| Package Short Url | https://bioconductor.org/packages/aracne.networks/ |
| Package Downloads Report | Download Stats |