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BiocBaseUtils

General utility functions for developing Bioconductor packages

Bioconductor version: Release (3.17)

The package provides utility functions related to package development. These include functions that replace slots, and selectors for show methods. It aims to coalesce the various helper functions often re-used throughout the Bioconductor ecosystem.

Author: Marcel Ramos [aut, cre] , Martin Morgan [ctb], Hervé Pagès [ctb]

Maintainer: Marcel Ramos <marcel.ramos at roswellpark.org>

Citation (from within R, enter citation("BiocBaseUtils")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocBaseUtils")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocBaseUtils")
BiocBaseUtils Quick Start HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Infrastructure, Software
Version 1.2.0
In Bioconductor since BioC 3.16 (R-4.2) (1 year)
License Artistic-2.0
Depends R (>= 4.2.0)
Imports methods, utils
Linking To
Suggests knitr, rmarkdown, BiocStyle, tinytest
System Requirements
Enhances
URL
Bug Reports https://www.github.com/Bioconductor/BiocBaseUtils/issues
See More
Depends On Me
Imports Me BiocFHIR, DNAfusion, MultiAssayExperiment, SingleCellMultiModal, TENxIO, UniProt.ws
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocBaseUtils_1.2.0.tar.gz
Windows Binary BiocBaseUtils_1.2.0.zip
macOS Binary (x86_64) BiocBaseUtils_1.2.0.tgz
macOS Binary (arm64) BiocBaseUtils_1.2.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocBaseUtils
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocBaseUtils
Bioc Package Browser https://code.bioconductor.org/browse/BiocBaseUtils/
Package Short Url https://bioconductor.org/packages/BiocBaseUtils/
Package Downloads Report Download Stats