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DelayedTensor

R package for sparse and out-of-core arithmetic and decomposition of Tensor

Bioconductor version: Release (3.17)

DelayedTensor operates Tensor arithmetic directly on DelayedArray object. DelayedTensor provides some generic function related to Tensor arithmetic/decompotision and dispatches it on the DelayedArray class. DelayedTensor also suppors Tensor contraction by einsum function, which is inspired by numpy einsum.

Author: Koki Tsuyuzaki [aut, cre]

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("DelayedTensor")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DelayedTensor")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DelayedTensor")
DelayedTensor HTML R Script
Einsum HTML R Script
TensorArithmetic HTML R Script
TensorDecomposition HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews DataRepresentation, DimensionReduction, Infrastructure, Software
Version 1.6.0
In Bioconductor since BioC 3.14 (R-4.1) (2 years)
License Artistic-2.0
Depends R (>= 4.1.0)
Imports methods, utils, DelayedArray, HDF5Array, BiocSingular, rTensor, DelayedRandomArray, irlba, Matrix, einsum
Linking To
Suggests markdown, rmarkdown, BiocStyle, knitr, testthat, magrittr, dplyr, reticulate
System Requirements
Enhances
URL
Bug Reports https://github.com/rikenbit/DelayedTensor/issues
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package DelayedTensor_1.6.0.tar.gz
Windows Binary DelayedTensor_1.6.0.zip (64-bit only)
macOS Binary (x86_64) DelayedTensor_1.6.0.tgz
macOS Binary (arm64) DelayedTensor_1.6.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/DelayedTensor
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/DelayedTensor
Bioc Package Browser https://code.bioconductor.org/browse/DelayedTensor/
Package Short Url https://bioconductor.org/packages/DelayedTensor/
Package Downloads Report Download Stats