IMAS

Integrative analysis of Multi-omics data for Alternative Splicing

Bioconductor version: Release (3.17)

Integrative analysis of Multi-omics data for Alternative splicing.

Author: Seonggyun Han, Younghee Lee

Maintainer: Seonggyun Han <hangost at ssu.ac.kr>

Citation (from within R, enter citation("IMAS")):

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IMAS")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IMAS")

IMAS : Integrative analysis of Multi-omics data for Alternative Splicing	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	AlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, ImmunoOncology, RNASeq, Regression, SNP, Sequencing, Software, Transcription
Version	1.24.0
In Bioconductor since	BioC 3.5 (R-3.4) (6.5 years)
License	GPL-2
Depends	R (> 3.0.0), GenomicFeatures, ggplot2, IVAS
Imports	doParallel, lme4, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, GenomeInfoDb, stats, ggfortify, grDevices, methods, Matrix, utils, graphics, gridExtra, grid, lattice, Rsamtools, survival, BiocParallel, GenomicAlignments, parallel
Linking To
Suggests	BiocStyle, RUnit
System Requirements
Enhances
URL

Follow Installation instructions to use this package in your R session.

Source Package	IMAS_1.24.0.tar.gz
Windows Binary	IMAS_1.24.0.zip
macOS Binary (x86_64)	IMAS_1.24.0.tgz
macOS Binary (arm64)	IMAS_1.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/IMAS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/IMAS
Bioc Package Browser	https://code.bioconductor.org/browse/IMAS/
Package Short Url	https://bioconductor.org/packages/IMAS/
Package Downloads Report	Download Stats