ISoLDE

Integrative Statistics of alleLe Dependent Expression

Bioconductor version: Release (3.17)

This package provides ISoLDE a new method for identifying imprinted genes. This method is dedicated to data arising from RNA sequencing technologies. The ISoLDE package implements original statistical methodology described in the publication below.

Author: Christelle Reynès [aut, cre], Marine Rohmer [aut], Guilhem Kister [aut]

Maintainer: Christelle Reynès <christelle.reynes at igf.cnrs.fr>

Citation (from within R, enter citation("ISoLDE")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ISoLDE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF
README	Text
NEWS	Text

Details

biocViews	Epigenetics, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Genetics, ImmunoOncology, MathematicalBiology, MultipleComparison, RNASeq, SNP, Sequencing, Software, Transcription
Version	1.28.0
In Bioconductor since	BioC 3.3 (R-3.3) (7.5 years)
License	GPL (>= 2.0)
Depends	R (>= 3.3.0), graphics, grDevices, stats, utils
Imports
Linking To
Suggests
System Requirements
Enhances
URL	www.r-project.org

Depends On Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ISoLDE_1.28.0.tar.gz
Windows Binary	ISoLDE_1.28.0.zip (64-bit only)
macOS Binary (x86_64)	ISoLDE_1.28.0.tgz
macOS Binary (arm64)	ISoLDE_1.28.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ISoLDE
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ISoLDE
Bioc Package Browser	https://code.bioconductor.org/browse/ISoLDE/
Package Short Url	https://bioconductor.org/packages/ISoLDE/
Package Downloads Report	Download Stats