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IsoCorrectoRGUI

Graphical User Interface for IsoCorrectoR

Bioconductor version: Release (3.17)

IsoCorrectoRGUI is a Graphical User Interface for the IsoCorrectoR package. IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O...), as well as high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously).

Author: Christian Kohler [cre, aut], Paul Kuerner [aut], Paul Heinrich [aut]

Maintainer: Christian Kohler <christian.kohler at ur.de>

Citation (from within R, enter citation("IsoCorrectoRGUI")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IsoCorrectoRGUI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IsoCorrectoRGUI")
IsoCorrectoR HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews GUI, ImmunoOncology, MassSpectrometry, Metabolomics, Preprocessing, Software
Version 1.16.0
In Bioconductor since BioC 3.9 (R-3.6) (4.5 years)
License GPL-3
Depends R (>= 3.6)
Imports IsoCorrectoR, readxl, tcltk2, tcltk, utils
Linking To
Suggests knitr, rmarkdown, testthat, BiocStyle
System Requirements
Enhances
URL https://genomics.ur.de/files/IsoCorrectoRGUI
See More
Depends On Me
Imports Me
Suggests Me IsoCorrectoR
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package IsoCorrectoRGUI_1.16.0.tar.gz
Windows Binary IsoCorrectoRGUI_1.16.0.zip
macOS Binary (x86_64) IsoCorrectoRGUI_1.16.0.tgz
macOS Binary (arm64) IsoCorrectoRGUI_1.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/IsoCorrectoRGUI
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/IsoCorrectoRGUI
Bioc Package Browser https://code.bioconductor.org/browse/IsoCorrectoRGUI/
Package Short Url https://bioconductor.org/packages/IsoCorrectoRGUI/
Package Downloads Report Download Stats