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LBE

Estimation of the false discovery rate.

Bioconductor version: Release (3.17)

LBE is an efficient procedure for estimating the proportion of true null hypotheses, the false discovery rate (and so the q-values) in the framework of estimating procedures based on the marginal distribution of the p-values without assumption for the alternative hypothesis.

Author: Cyril Dalmasso

Maintainer: Cyril Dalmasso <dalmasso at vjf.inserm.fr>

Citation (from within R, enter citation("LBE")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LBE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LBE")
LBE Vignette PDF R Script
Reference Manual PDF

Details

biocViews MultipleComparison, Software
Version 1.68.0
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License GPL-2
Depends stats
Imports graphics, grDevices, methods, stats, utils
Linking To
Suggests qvalue
System Requirements
Enhances
URL
See More
Depends On Me PhViD
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package LBE_1.68.0.tar.gz
Windows Binary LBE_1.68.0.zip
macOS Binary (x86_64) LBE_1.68.0.tgz
macOS Binary (arm64) LBE_1.68.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/LBE
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/LBE
Bioc Package Browser https://code.bioconductor.org/browse/LBE/
Package Short Url https://bioconductor.org/packages/LBE/
Package Downloads Report Download Stats