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MGFR

Marker Gene Finder in RNA-seq data

Bioconductor version: Release (3.17)

The package is designed to detect marker genes from RNA-seq data.

Author: Khadija El Amrani

Maintainer: Khadija El Amrani <a.khadija at gmx.de>

Citation (from within R, enter citation("MGFR")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MGFR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MGFR")
Using MGFR PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews GeneExpression, Genetics, ImmunoOncology, RNASeq, Software
Version 1.26.0
In Bioconductor since BioC 3.4 (R-3.3) (7 years)
License GPL-3
Depends R (>= 3.5)
Imports biomaRt, annotate
Linking To
Suggests
System Requirements
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Depends On Me sampleClassifier
Imports Me
Suggests Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MGFR_1.26.0.tar.gz
Windows Binary MGFR_1.26.0.zip
macOS Binary (x86_64) MGFR_1.26.0.tgz
macOS Binary (arm64) MGFR_1.26.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MGFR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MGFR
Bioc Package Browser https://code.bioconductor.org/browse/MGFR/
Package Short Url https://bioconductor.org/packages/MGFR/
Package Downloads Report Download Stats