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MOSim

Multi-Omics Simulation (MOSim)

Bioconductor version: Release (3.17)

MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups.

Author: Carlos Martínez [aut], Carolina Monzó [aut], Sonia Tarazona [cre, aut]

Maintainer: Sonia Tarazona <sotacam at gmail.com>

Citation (from within R, enter citation("MOSim")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MOSim")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MOSim")
MOSim PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentalDesign, RNASeq, Software, TimeCourse
Version 1.14.0
In Bioconductor since BioC 3.10 (R-3.6) (4 years)
License GPL-3
Depends R (>= 4.2.0)
Imports HiddenMarkov, zoo, methods, matrixStats, dplyr, stringi, lazyeval, rlang, stats, utils, purrr, scales, stringr, tibble, tidyr, ggplot2, Biobase, IRanges, S4Vectors
Linking To
Suggests testthat, knitr, rmarkdown, BiocStyle
System Requirements
Enhances
URL https://github.com/ConesaLab/MOSim
Bug Reports https://github.com/ConesaLab/MOSim/issues
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MOSim_1.14.0.tar.gz
Windows Binary MOSim_1.14.0.zip (64-bit only)
macOS Binary (x86_64) MOSim_1.14.0.tgz
macOS Binary (arm64) MOSim_1.14.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MOSim
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MOSim
Bioc Package Browser https://code.bioconductor.org/browse/MOSim/
Package Short Url https://bioconductor.org/packages/MOSim/
Package Downloads Report Download Stats