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Prostar

Provides a GUI for DAPAR

Bioconductor version: Release (3.17)

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("Prostar")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Prostar")
Prostar User Manual PDF R Script
Reference Manual PDF
README Text
NEWS Text

Details

biocViews GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software
Version 1.32.1
In Bioconductor since BioC 3.2 (R-3.2) (8 years)
License Artistic-2.0
Depends R (>= 4.3.0)
Imports DAPAR(>= 1.32.0), DAPARdata(>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot
Linking To
Suggests BiocStyle, BiocManager, testthat, shinyTree, knitr, colourpicker, gtools, XML, R.utils, RColorBrewer, DT, shinyWidgets, sass, rclipboard
System Requirements
Enhances
URL http://www.prostar-proteomics.org/
Bug Reports https://github.com/prostarproteomics/Prostar/issues
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Prostar_1.32.1.tar.gz
Windows Binary Prostar_1.32.3.zip
macOS Binary (x86_64) Prostar_1.32.5.tgz
macOS Binary (arm64) Prostar_1.32.5.tgz
Source Repository git clone https://git.bioconductor.org/packages/Prostar
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Prostar
Bioc Package Browser https://code.bioconductor.org/browse/Prostar/
Package Short Url https://bioconductor.org/packages/Prostar/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive