RCyjs

Display and manipulate graphs in cytoscape.js

Bioconductor version: Release (3.17)

Interactive viewing and exploration of graphs, connecting R to Cytoscape.js, using websockets.

Author: Paul Shannon

Maintainer: Paul Shannon <paul.thurmond.shannon at gmail.com>

Citation (from within R, enter citation("RCyjs")):

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RCyjs")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCyjs")

RCyjs: programmatic access to the web browser-based network viewer, cytoscape.js	HTML	R Script
Reference Manual	PDF
README	Text
NEWS	Text
LICENSE	Text

biocViews	GraphAndNetwork, Software, ThirdPartyClient, Visualization
Version	2.22.0
In Bioconductor since	BioC 3.1 (R-3.2) (8.5 years)
License	MIT + file LICENSE
Depends	R (>= 3.5.0), BrowserViz(>= 2.7.18), graph(>= 1.56.0)
Imports	methods, httpuv (>= 1.5.0), BiocGenerics, base64enc, utils
Linking To
Suggests	RUnit, BiocStyle, knitr, rmarkdown
System Requirements
Enhances
URL

Follow Installation instructions to use this package in your R session.

Source Package	RCyjs_2.22.0.tar.gz
Windows Binary	RCyjs_2.22.0.zip
macOS Binary (x86_64)	RCyjs_2.22.0.tgz
macOS Binary (arm64)	RCyjs_2.22.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RCyjs
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RCyjs
Bioc Package Browser	https://code.bioconductor.org/browse/RCyjs/
Package Short Url	https://bioconductor.org/packages/RCyjs/
Package Downloads Report	Download Stats