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annotationTools

Annotate microarrays and perform cross-species gene expression analyses using flat file databases

Bioconductor version: Release (3.17)

Functions to annotate microarrays, find orthologs, and integrate heterogeneous gene expression profiles using annotation and other molecular biology information available as flat file database (plain text files).

Author: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>

Maintainer: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>

Citation (from within R, enter citation("annotationTools")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("annotationTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("annotationTools")
annotationTools: Overview PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Annotation, Microarray, Software
Version 1.74.0
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License GPL
Depends
Imports Biobase, stats
Linking To
Suggests BiocStyle
System Requirements
Enhances
URL
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Depends On Me
Imports Me CoSIA
Suggests Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package annotationTools_1.74.0.tar.gz
Windows Binary annotationTools_1.74.0.zip
macOS Binary (x86_64) annotationTools_1.74.0.tgz
macOS Binary (arm64) annotationTools_1.74.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/annotationTools
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/annotationTools
Bioc Package Browser https://code.bioconductor.org/browse/annotationTools/
Package Short Url https://bioconductor.org/packages/annotationTools/
Package Downloads Report Download Stats