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flowViz

Visualization for flow cytometry

Bioconductor version: Release (3.17)

Provides visualization tools for flow cytometry data.

Author: B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang

Maintainer: Mike Jiang <mike at ozette.com>

Citation (from within R, enter citation("flowViz")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowViz")
Visualizing Gates with Flow Cytometry Data HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software, Visualization
Version 1.64.0
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License Artistic-2.0
Depends R (>= 2.7.0), flowCore(>= 1.41.9), lattice
Imports stats4, Biobase, flowCore, graphics, grDevices, grid, KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer, stats, utils, hexbin, IDPmisc
Linking To
Suggests colorspace, flowStats, knitr, rmarkdown, markdown, testthat
System Requirements
Enhances
URL
See More
Depends On Me flowFP, flowTrans, flowVS
Imports Me flowDensity, flowStats, flowTrans, openCyto
Suggests Me flowBeads, flowClean, flowCore, flowTime, ggcyto
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowViz_1.64.0.tar.gz
Windows Binary flowViz_1.64.0.zip
macOS Binary (x86_64) flowViz_1.64.0.tgz
macOS Binary (arm64) flowViz_1.64.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowViz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowViz
Bioc Package Browser https://code.bioconductor.org/browse/flowViz/
Package Short Url https://bioconductor.org/packages/flowViz/
Package Downloads Report Download Stats