intansv
Integrative analysis of structural variations
Bioconductor version: Release (3.17)
This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.
Author: Wen Yao <ywhzau at gmail.com>
Maintainer: Wen Yao <ywhzau at gmail.com>
Citation (from within R, enter
citation("intansv")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("intansv")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("intansv")| An Introduction to intansv | R Script | |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Annotation, Genetics, Sequencing, Software |
| Version | 1.40.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 2.14.0), plyr, ggbio, GenomicRanges |
| Imports | BiocGenerics, IRanges |
| Linking To | |
| Suggests | |
| System Requirements | |
| Enhances | |
| URL |
See More
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | intansv_1.40.0.tar.gz |
| Windows Binary | intansv_1.40.0.zip |
| macOS Binary (x86_64) | intansv_1.40.0.tgz |
| macOS Binary (arm64) | intansv_1.40.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/intansv |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/intansv |
| Bioc Package Browser | https://code.bioconductor.org/browse/intansv/ |
| Package Short Url | https://bioconductor.org/packages/intansv/ |
| Package Downloads Report | Download Stats |