logicFS
Identification of SNP Interactions
Bioconductor version: Release (3.17)
Identification of interactions between binary variables using Logic Regression. Can, e.g., be used to find interesting SNP interactions. Contains also a bagging version of logic regression for classification.
Author: Holger Schwender, Tobias Tietz
Maintainer: Holger Schwender <holger.schw at gmx.de>
Citation (from within R, enter
citation("logicFS")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("logicFS")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("logicFS")| logicFS Manual | R Script | |
| Reference Manual |
Details
| biocViews | Classification, Genetics, SNP, Software |
| Version | 2.20.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (17.5 years) |
| License | LGPL (>= 2) |
| Depends | LogicReg, mcbiopi, survival |
| Imports | graphics, methods, stats |
| Linking To | |
| Suggests | genefilter, siggenes |
| System Requirements | |
| Enhances | |
| URL |
See More
| Depends On Me | |
| Imports Me | |
| Suggests Me | trio |
| Links To Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | logicFS_2.20.0.tar.gz |
| Windows Binary | logicFS_2.20.0.zip |
| macOS Binary (x86_64) | logicFS_2.20.0.tgz |
| macOS Binary (arm64) | logicFS_2.20.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/logicFS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/logicFS |
| Bioc Package Browser | https://code.bioconductor.org/browse/logicFS/ |
| Package Short Url | https://bioconductor.org/packages/logicFS/ |
| Package Downloads Report | Download Stats |