This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

metaMS

MS-based metabolomics annotation pipeline

Bioconductor version: Release (3.17)

MS-based metabolomics data processing and compound annotation pipeline.

Author: Ron Wehrens [aut] (author of GC-MS part, Initial Maintainer), Pietro Franceschi [aut] (author of LC-MS part), Nir Shahaf [ctb], Matthias Scholz [ctb], Georg Weingart [ctb] (development of GC-MS approach), Elisabete Carvalho [ctb] (testing and feedback of GC-MS pipeline), Yann Guitton [ctb, cre] , Julien Saint-Vanne [ctb]

Maintainer: Yann Guitton <yann.guitton at gmail.com>

Citation (from within R, enter citation("metaMS")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("metaMS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metaMS")
runGC PDF R Script
runLC PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.36.0
In Bioconductor since BioC 2.14 (R-3.1) (9.5 years)
License GPL (>= 2)
Depends R (>= 4.0), methods, CAMERA, xcms(>= 1.35)
Imports Matrix, tools, robustbase, BiocGenerics, graphics, stats, utils
Linking To
Suggests metaMSdata, RUnit
System Requirements
Enhances
URL https://github.com/yguitton/metaMS
See More
Depends On Me
Imports Me
Suggests Me CluMSID
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package metaMS_1.36.0.tar.gz
Windows Binary metaMS_1.36.0.zip
macOS Binary (x86_64) metaMS_1.36.0.tgz
macOS Binary (arm64) metaMS_1.36.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/metaMS
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/metaMS
Bioc Package Browser https://code.bioconductor.org/browse/metaMS/
Package Short Url https://bioconductor.org/packages/metaMS/
Package Downloads Report Download Stats