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rhdf5filters

HDF5 Compression Filters

Bioconductor version: Release (3.17)

Provides a collection of additional compression filters for HDF5 datasets. The package is intended to provide seemless integration with rhdf5, however the compiled filters can also be used with external applications.

Author: Mike Smith [aut, cre]

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("rhdf5filters")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("rhdf5filters")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rhdf5filters")
HDF5 Compression Filters HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews DataImport, Infrastructure, Software
Version 1.12.1
In Bioconductor since BioC 3.11 (R-4.0) (3.5 years)
License BSD_2_clause + file LICENSE
Depends
Imports
Linking To Rhdf5lib
Suggests BiocStyle, knitr, rmarkdown, tinytest, rhdf5(>= 2.34.0)
System Requirements GNU make
Enhances
URL https://github.com/grimbough/rhdf5filters
Bug Reports https://github.com/grimbough/rhdf5filters
See More
Depends On Me
Imports Me HDF5Array, rhdf5
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rhdf5filters_1.12.1.tar.gz
Windows Binary rhdf5filters_1.12.1.zip
macOS Binary (x86_64) rhdf5filters_1.12.1.tgz
macOS Binary (arm64) rhdf5filters_1.12.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/rhdf5filters
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rhdf5filters
Bioc Package Browser https://code.bioconductor.org/browse/rhdf5filters/
Package Short Url https://bioconductor.org/packages/rhdf5filters/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive