This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

BSgenome.Alyrata.JGI.v1

Arabidopsis lyrata full genome (JGI version V1.0)

Bioconductor version: Release (3.17)

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel

Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>

Citation (from within R, enter citation("BSgenome.Alyrata.JGI.v1")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Alyrata.JGI.v1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Alyrata, AnnotationData, Genetics
Version 1.0.1
License Artistic-2.0
Depends BSgenome(>= 1.58.0)
Imports BSgenome
Linking To
Suggests
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Alyrata.JGI.v1_1.0.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/
Package Downloads Report Download Stats