This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

BSgenome.Mmusculus.UCSC.mm9

Full genome sequences for Mus musculus (UCSC version mm9)

Bioconductor version: Release (3.17)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, Jul. 2007) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm9")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Mmusculus.UCSC.mm9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews AnnotationData, BSgenome, Genetics, Mus_musculus
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
Linking To
Suggests TxDb.Mmusculus.UCSC.mm9.knownGene
System Requirements
Enhances
URL
See More
Depends On Me BSgenome.Mmusculus.UCSC.mm9.masked
Imports Me BSgenome.Mmusculus.UCSC.mm9.masked, ChIPComp, musicatk, SPLINTER
Suggests Me CAGEWorkflow, chipseq, circRNAprofiler, compEpiTools, EpiCompare, GRaNIE, HiCDCPlus, MEDME, methrix, MMDiff2
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Mmusculus.UCSC.mm9_1.4.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm9/
Package Downloads Report Download Stats