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MafDb.1Kgenomes.phase1.hs37d5

Minor allele frequency data from 1000 Genomes Phase 1 for hs37d5

Bioconductor version: Release (3.17)

Store minor allele frequency data from the Phase 1 of the 1000 Genomes Project for the human genome version hs37d5.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.1Kgenomes.phase1.hs37d5")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafDb.1Kgenomes.phase1.hs37d5")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.10.0
License Artistic-2.0
Depends R (>= 3.5.0), GenomicScores(>= 1.9.6)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
Linking To
Suggests SNPlocs.Hsapiens.dbSNP144.GRCh37
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me GenomicScores, VariantFiltering
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.1Kgenomes.phase1.hs37d5_3.10.0.tar.gz
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macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/MafDb.1Kgenomes.phase1.hs37d5/
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