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MafDb.TOPMed.freeze5.hg19

Minor allele frequency data from TOPMed for hg19

Bioconductor version: Release (3.17)

Store minor allele frequency data from NHLBI TOPMed for the human genome version hg19.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.TOPMed.freeze5.hg19")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafDb.TOPMed.freeze5.hg19")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.10.0
License Artistic-2.0
Depends R (>= 3.5.0), GenomicScores(>= 1.9.6)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
Linking To
Suggests SNPlocs.Hsapiens.dbSNP144.GRCh37
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.TOPMed.freeze5.hg19_3.10.0.tar.gz
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macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/MafDb.TOPMed.freeze5.hg19/
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