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MafH5.gnomAD.v3.1.1.GRCh38

Minor allele frequency data from gnomAD version 3.1.1 for GRCh38

Bioconductor version: Release (3.17)

Store minor allele frequency data from the Genome Aggregation Database (gnomAD version 3.1.1) for the human genome version GRCh38.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafH5.gnomAD.v3.1.1.GRCh38")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafH5.gnomAD.v3.1.1.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.13.1
License Artistic-2.0
Depends R (>= 4.0.0), GenomicScores(>= 2.3.4)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array
Linking To
Suggests SNPlocs.Hsapiens.dbSNP149.GRCh38
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafH5.gnomAD.v3.1.1.GRCh38_3.13.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/MafH5.gnomAD.v3.1.1.GRCh38/
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