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JASPAR2016

Data package for JASPAR 2016

Bioconductor version: Release (3.17)

Data package for JASPAR 2016. To search this databases, please use the package TFBSTools (>= 1.8.1).

Author: Ge Tan <ge.tan09 at imperial.ac.uk>

Maintainer: Ge Tan <ge.tan09 at imperial.ac.uk>

Citation (from within R, enter citation("JASPAR2016")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("JASPAR2016")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, GeneRegulation, MotifAnnotation
Version 1.28.0
License GPL-2
Depends R (>= 3.2.2), methods
Imports
Linking To
Suggests
System Requirements
Enhances
URL http://jaspar.genereg.net/
See More
Depends On Me
Imports Me ATACCoGAPS
Suggests Me CAGEWorkflow, chromVAR, TFBSTools
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package JASPAR2016_1.28.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/JASPAR2016
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/JASPAR2016
Package Short Url https://bioconductor.org/packages/JASPAR2016/
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