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LungCancerACvsSCCGEO

A lung cancer dataset that can be used with maPredictDSC package for developing outcome prediction models from Affymetrix CEL files.

Bioconductor version: Release (3.17)

This package contains 30 Affymetrix CEL files for 7 Adenocarcinoma (AC) and 8 Squamous cell carcinoma (SCC) lung cancer samples taken at random from 3 GEO datasets (GSE10245, GSE18842 and GSE2109) and other 15 samples from a dataset produced by the organizers of the IMPROVER Diagnostic Signature Challenge available from GEO (GSE43580).

Author: Adi Laurentiu Tarca <atarca at med.wayne.edu>

Maintainer: Adi Laurentiu Tarca <atarca at med.wayne.edu>

Citation (from within R, enter citation("LungCancerACvsSCCGEO")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LungCancerACvsSCCGEO")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews CancerData, ExperimentData, GEO, LungCancerData, MicroarrayData
Version 1.36.0
License GPL-2
Depends R (>= 2.15.0)
Imports
Linking To
Suggests
System Requirements
Enhances
URL http://bioinformaticsprb.med.wayne.edu/
See More
Depends On Me maPredictDSC
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package LungCancerACvsSCCGEO_1.36.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/LungCancerACvsSCCGEO
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/LungCancerACvsSCCGEO
Package Short Url https://bioconductor.org/packages/LungCancerACvsSCCGEO/
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