This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

TCGAWorkflowData

Data for TCGA Workflow

Bioconductor version: Release (3.17)

This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".

Author: Tiago Chedraoui Silva <tiagochst at gmail.com>

Maintainer: Tiago Chedraoui Silva <tiagochst at gmail.com>

Citation (from within R, enter citation("TCGAWorkflowData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TCGAWorkflowData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TCGAWorkflowData")
'Example data for TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages' HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews CancerData, ExperimentData, Homo_sapiens_Data, MicroarrayData
Version 1.24.1
License GPL-3
Depends R (>= 3.5.0)
Imports SummarizedExperiment
Linking To
Suggests knitr, rmarkdown, pander, testthat, BiocStyle
System Requirements
Enhances
URL https://f1000research.com/articles/5-1542/v2
Bug Reports https://github.com/BioinformaticsFMRP/TCGAWorkflow/issues
See More
Depends On Me
Imports Me TCGAWorkflow
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TCGAWorkflowData_1.24.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TCGAWorkflowData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TCGAWorkflowData
Package Short Url https://bioconductor.org/packages/TCGAWorkflowData/
Package Downloads Report Download Stats