brgedata

Exposures, Gene Expression and Methylation data for ilustration purpouses

Bioconductor version: Release (3.17)

This package contains several sets of omics data including Gene Expression (ExpressionSet), Methylation (GenomicRatioSet), Proteome and Exposome (ExposomeSet). This data is used in vignettes and exaples at MEAL, MultiDataSet and omicRexposome.

Author: Dolors Pelegri-Siso [aut, cre], Carlos Ruiz-Arenas [aut], Carles Hernandez-Ferrer [aut], Juan R. Gonzalez [aut]

Maintainer: Dolors Pelegri-Siso <dolors.pelegri at isglobal.org>

Citation (from within R, enter citation("brgedata")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("brgedata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("brgedata")

brgedata -- data R package with three omic data-set and exposome data-set from the same Spanish pupulation	HTML	R Script
Reference Manual	PDF
LICENSE	Text

Details

biocViews	ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version	1.22.1
License	MIT + file LICENSE
Depends	R (>= 3.5.0), Biobase
Imports	SummarizedExperiment
Linking To
Suggests	minfi, MultiAssayExperiment, knitr, rmarkdown, BiocStyle, rexposome
System Requirements
Enhances
URL

Depends On Me
Imports Me
Suggests Me	MEAL, MultiDataSet, omicRexposome
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	brgedata_1.22.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/brgedata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/brgedata
Package Short Url	https://bioconductor.org/packages/brgedata/
Package Downloads Report	Download Stats