derfinderData

Processed BigWigs from BrainSpan for examples

Bioconductor version: Release (3.17)

Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.

Author: Leonardo Collado-Torres [aut, cre] , Andrew Jaffe [aut] , Jeffrey Leek [aut, ths]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("derfinderData")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("derfinderData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderData")

Introduction to derfinderData	HTML	R Script
Reference Manual	PDF
NEWS	Text

Details

biocViews	ExperimentData, Homo_sapiens_Data, RNASeqData
Version	2.18.0
License	Artistic-2.0
Depends	R (>= 3.5.0)
Imports
Linking To
Suggests	sessioninfo, knitr (>= 1.6), RefManageR, rmarkdown (>= 0.3.3), BiocStyle
System Requirements
Enhances
URL	https://github.com/leekgroup/derfinderData
Bug Reports	https://github.com/leekgroup/derfinderData/issues

Depends On Me
Imports Me
Suggests Me	derfinder, derfinderPlot
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	derfinderData_2.18.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/derfinderData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/derfinderData
Package Short Url	https://bioconductor.org/packages/derfinderData/
Package Downloads Report	Download Stats