This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

plasFIA

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

FIA-HRMS plasma dataset

Bioconductor version: Release (3.17)

Positive Ionization FIA-HRMS data of human plasma spiked with a pool of 40 compounds acquired in FIA-HRMS mode on an orbitrap fusion. plasFIA also include the result of the processing by the proFIA package with adapted parameters for an Orbitrap Fusion.

Author: Alexis Delabriere, Etienne Thevenot, Ulli Hohenester and Christophe Junot.

Maintainer: Alexis Delabriere <alexis.delabriere at outlook.fr>

Citation (from within R, enter citation("plasFIA")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("plasFIA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, MassSpectrometryData
Version 1.28.0
License LGPL
Depends proFIA
Imports
Linking To
Suggests
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me proFIA
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/plasFIA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/plasFIA
Package Short Url https://bioconductor.org/packages/plasFIA/
Package Downloads Report Download Stats